FMO04914.5prime Sequence
1270 bp (908 high quality bases) assembled on 2008-08-12
> FMO04914.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTGATCCC
CGTCGTCGTTTCCGTAACAAAAAGCGGGATGAAGCCTGCTCCGGCCTCCT
GGCACCCGTGACCATCGCCCGGCGCGAGGACGCCGCCCGCATGATGCAGC
CAAAAATTCTGCTAAAGAAGGATCGCGATCGGGAGCAAGAGACCTGGGAC
AGAGAGCGGGACAAGGATAGGAAGCTGGAGAGGGACAGGGAGGCGGAGCC
AAGTCCCAGTTGTTACCCCGATACACCGCCGGCCCTCAAAACGATGATCG
TCAATCGTACGGGTGAGGTGCGGCCTGCAGACAGATGCCAGATGCCTTTG
GCCGGAGGTGCTCTTGTCCAGGGAAGCGGGCAATTGTCCGCCGTGCCATC
CAGCTCCGTTTGCGCCGCATTGGTTAGCTCGGTACCAACTAGCAGGGACA
AGGGGAGCTGCAGTGGTGGTGCCGGAACAGCTGGCACCTCGGCCGGAGCA
CCGAATGCTCTCCAGGAGCTGCAGCCGCCACGCATGAACCGTCCCACACC
CCTAATCGTGGCCAATGGTATTTTTAATGCCAATGCCCGCAAGCTCTTCC
ACAAAACCAATACGGACTTCACCGTAATCGGGGTCCTGGGTGGTCAGAGT
TCCGGAAAAAGCACGCTGCTCAATCTTCTGGCCGCAGAGCGGTCCCTGGA
CTACGACTACTATCAACATCTATTCTCTCCAGAGGCGGATGAATGCATCT
TTGCCACGCGTCACAAGTTGAAGCCGAACAATGGGGCAGAACAGCATTTT
TGCGTCCTCGCACGGAACCCCTGCAGTTTTTTATCACCCGGGAACGTCAC
ATACTGCTGGACACACCACCGTTGATGCCTGTAGGGCAAGGACTCGGATC
ACCAGGATCTTCACTCCCTGGGCACCATGGCGCAACTGTTGAGTGTATGC
CACATATTAATTTTAGTCATCGATGGCTTGGCCCTTGGAACAATTCCGTC
TGAAACAACGCCTGCCCTTCCGCCTGGAGAACCGACGCCTTCACTTGCCA
AAGGCTATGGTACCGGGATTACAATGCCGGCAAGTAGTATTCCGTCCCGC
GCGGCGGTGGCCCATCCGAATACGAACTTGGAGAATAAAGCCAAGCGGGG
AAACGAACCGGGAAAAAAAGTTGGGCCTACTTTTATAACCGGGCCCACAC
GGGGCCTGCCCCATATACCGGGGATAAAAGAGTCGAATGCCACGGGTCTA
GTAAACACACATCCTCCCTC
FMO04914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3857-RA | 2341 | CG3857-RA | 87..1232 | 39..1224 | 4780 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1938994..1939954 | 1003..39 | 4535 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:55:20 has no hits.
FMO04914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:59 Download gff for
FMO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 82..1137 | 30..1109 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:37 Download gff for
FMO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 49..1104 | 30..1109 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:50 Download gff for
FMO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 82..1137 | 30..1109 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:50 Download gff for
FMO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1938904..1939959 | 30..1109 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:59 Download gff for
FMO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1832937..1833992 | 30..1109 | 96 | | Minus |
