FMO04916.5prime Sequence
1186 bp (952 high quality bases) assembled on 2008-08-12
> FMO04916.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGCAAAGATT
TCCGACGCAGGCGACCGTGGAGAATCCACGTTATGGACAGCTAATCATAG
GACCTCCTGGTTCTGGGAAAACCACCTATTGCGGTGAGGCCCTTAAGTTC
TATCGCGAACTGGGCCGTCAGGTGGGCGTTGTGAATCTGGATCCAGCCAA
CGAAAACATGTCCTACGAACCGGTGCTAAGTGTGATGGAGCTAATCACTG
TGGAGGATTGCATGGAGCACCTGAAGCTGGGACCAAACGGAGCTCTAATG
CACTGCGCTGAGTATCTGGCCGACCATTTGGAGGATTGGCTGTTGCCGGC
ACTGCGCAAACTAAGCGCCACTTACAACTACTTCCTGTTCGACTGTCCCG
GCCAAGTTGAGCTATATACCCATCACAACGCTATGGCCCGGATTTTCGAG
CGTTTGGAGCGTGAAAGATATAGCCTGGTCACCGTTAACCTTATAGATTC
CCATTACTGCTCGGAGCCTGCCAAATTCATTGCCACTTTGCTGATGGCAT
TGAACACCATGTTGCGGATGAGTCTACCCCACGTTAATGTGCTTTCCAAG
GCCGATCTGCTAAAGATGCACGAGACCAAGTTACACTTTAACGTGGACTA
TTATACGGACGTCCTGGACCTCAAGTATCTGCTGGACAAACTGGACGATG
ATCCCGCCATGCGCAAGTATCGAAAACTGAATGCAGCCATCTGCTCCATG
GTGGAGGACTACGCTCTCGTTTCGTTCCAACTGCTGGACGTCTTCAACAC
GGACAGCATGCTCCGCTTGCGCAATCACATCGACAAGGCTAATGGATACG
TCTACAATGCAGGTGAGGAGCAGACGGTCAACTCACTACTAGCCTGCGCC
GTGGGTGCAGAACTGAGGCGTCCTGACTGTTCACCTAATGACAGTTCAAC
ATCGTGCCCGGCAGTATGTCTATCTATCTATCTATCTATCCACTAGCTAG
GATCTGCTGAAGTGATCCCATAAAGCCGGCACAGCGCATCGTGATCAGCT
ACGATTCAAGTCAGACGTCATGCCCCGCCTCGATGATATCCATGACCAGT
GACTACCGTACTGCGATCGAAGATGGCTAGACTGATCAAGTCCTAACGCA
TGGACCCCTTGACCAGACAGCAGCACGACAGTCTCT
FMO04916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10222-RB | 1332 | CG10222-RB | 2..885 | 37..919 | 4350 | 99.5 | Plus |
| CG10222-RA | 1074 | CG10222-RA | 2..885 | 37..919 | 4350 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13411577..13412452 | 912..37 | 4335 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:01:14 has no hits.
FMO04916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:57 Download gff for
FMO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10222-RA | 2..885 | 37..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:14 Download gff for
FMO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10222-RA | 2..885 | 37..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:25 Download gff for
FMO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10222-RA | 2..885 | 37..919 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:25 Download gff for
FMO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13411569..13412457 | 29..919 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:57 Download gff for
FMO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13404669..13405557 | 29..919 | 99 | | Minus |
