Clone FMO04918 Report

Search the DGRC for FMO04918

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:18
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10418-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04918.5prime Sequence

340 bp (340 high quality bases) assembled on 2008-08-12

> FMO04918.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTCTTTTACT
CCTTCTTCAAGTCGCTGGTGGGCAAGGAAGTCGTTGTGGAGTTGAAAAAC
GACCTCAGCATATGTGGCACCCTGCACTCGGTGGATCAGTACCTGAACAT
CAAGCTGACGGATATCAGTGTCACAGATCCGGACAAGTACCCCCACATGC
TGAGCGTCAAGAACTGCTTCATCCGTGGCTCCGTGGTGCGATACGTGCAG
CTGCCGGGCGACGAGGTGGACACCCAGCTGCTCCAGGATGCGGCGCGAAA
GGAGGCTGTTGTGAGCACAAGAGCAAGCTTTCTAGACCAT

FMO04918.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG10418-RA 437 CG10418-RA 40..324 38..322 1425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12336907..12337123 106..322 1085 100 Plus
3L 28110227 3L 12336778..12336846 40..108 345 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:53:05 has no hits.

FMO04918.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:51 Download gff for FMO04918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10418-RA 32..328 30..327 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:46 Download gff for FMO04918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10418-RA 32..328 30..327 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:08 Download gff for FMO04918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10418-RA 32..328 30..327 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:08 Download gff for FMO04918.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 12336771..12336846 28..108 93 -> Plus
3L 12336910..12337127 109..327 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:51 Download gff for FMO04918.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12329871..12329946 28..108 93 -> Plus
arm_3L 12330010..12330227 109..327 99   Plus