FMO04923.5prime Sequence
330 bp (330 high quality bases) assembled on 2008-08-12
> FMO04923.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTCTTCGT
TCTCGTGGCTATCGCTTTTGCTCTGCTTGCTTGCGTGGCGCAGGCTCAGC
CAGTTTCCGATGTGGATCCAATTCCAGAGGATCATGTCCTGGTGCATGAG
GATGCCCACCAGGAGGTGCTGCAGCATAGCCGCCAGAAGCGAGCCACATG
CGACCTACTCTCCAAGTGGAACTGGAACCACACCGCCTGCGCCGGCCACT
GCATTGCCAAGGGGTTCAAAGGCGGCTACTGCAACGACAAGGCCGTCTGC
GTTTGCCGCAATGCAAGCTTTCTAGACCAT
FMO04923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Def-RA | 399 | CG1385-RA | 10..285 | 37..312 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10054292..10054567 | 312..37 | 1380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:55:09 has no hits.
FMO04923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:54 Download gff for
FMO04923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 10..285 | 37..312 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:12 Download gff for
FMO04923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 1..279 | 37..315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:42 Download gff for
FMO04923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 10..285 | 37..312 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:42 Download gff for
FMO04923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10054292..10054567 | 37..312 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:54 Download gff for
FMO04923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5941797..5942072 | 37..312 | 100 | | Minus |
