FMO04924.5prime Sequence
457 bp (457 high quality bases) assembled on 2008-08-12
> FMO04924.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTCACCC
TATTCTGTATTGCTCTGGCAGCTTTTTTGTCCATGGGACAGTGTAATCCG
GACTTTCGCCAAATAATGCAACAGTGCATGGAGACCAACCAAGTGACCGA
GGCTGATCTCAAGGAGTTCATGGCCAGCGGGATGCAGAGCAGTGCCAAGG
AGAACCTCAAGTGCTACACCAAGTGCCTGATGGAGAAGCAGGGTCATCTC
ACCAATGGCCAGTTCAATGCTCAGGCTATGCTCGACACTCTCAAAAATGT
GCCTCAGATCAAGGACAAAATGGACGAGATTTCCTCGGGAGTGAATGCCT
GCAAGGACATCAAGGGAACCAACGATTGCGACACGGCCTTTAAGGTTACC
ATGTGCCTGAAGGAGCACAAGGCCATTCCAGGACATCACGCAAGCTTTCT
AGACCAT
FMO04924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56h-RB | 495 | CG13874-RB | 24..425 | 38..439 | 2010 | 100 | Plus |
| Obp56h-RA | 593 | CG13874-RA | 24..425 | 38..439 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19815687..19816036 | 90..439 | 1750 | 100 | Plus |
| 2R | 25286936 | 2R | 19815577..19815630 | 38..91 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:41:56 has no hits.
FMO04924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:10 Download gff for
FMO04924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RA | 19..428 | 33..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:33 Download gff for
FMO04924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RA | 1..405 | 38..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:43 Download gff for
FMO04924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RA | 19..428 | 33..443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:43 Download gff for
FMO04924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19815572..19815630 | 33..91 | 96 | -> | Plus |
| 2R | 19815689..19816039 | 92..443 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:10 Download gff for
FMO04924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15703077..15703135 | 33..91 | 96 | -> | Plus |
| arm_2R | 15703194..15703544 | 92..443 | 99 | | Plus |
