FMO04925.5prime Sequence
516 bp (516 high quality bases) assembled on 2008-08-12
> FMO04925.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACGTCCATTGC
GGGAGGCCACGGCGAGGCGAATCCAAACAGCTCCTGGCTGAGTGCCCGGG
GATTTTGGCTAGCATACCTCCTGGGCCTGCTGTCGGTGCACCTGCTCTTC
TTATCAGTGCCCTTCGTTAGCATTCCATGGGCCTGGACGGCTACCAACCT
GCTTCACAATGCAGCCCACCTGTACTTTCTGCACGTCATCAAGGGCGCTC
CCTGGCTCAGCACGGAGAACGATCCCAGCCGGCGTTGGACGCACTGGGAA
CAGATCGATGACGGGGTACAGATGACCACAACGCGCAAGTTCCTCACAGC
TGTTCCCATTGTTCTTTTCCTACTTACCTGTCTGTACACCCGAAACAACA
CGGAACACTTTATCCCAAACTTTATATCCCTGGTGGTCGTCACGCTTCCC
AAGCTGCCGCAGTTCCACGGCGTGCGGCTGTTCAACATTAACAAGTACGC
AAGCTTTCTAGACCAT
FMO04925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ORMDL-RA | 674 | CG14577-RA | 79..542 | 35..498 | 2305 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21635383..21635562 | 35..214 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 21635618..21635769 | 214..365 | 745 | 99.3 | Plus |
| 3L | 28110227 | 3L | 21635987..21636119 | 366..498 | 665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:22 has no hits.
FMO04925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:05 Download gff for
FMO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 70..550 | 22..509 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:50 Download gff for
FMO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 1..465 | 37..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:06 Download gff for
FMO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 70..550 | 22..509 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:06 Download gff for
FMO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21635374..21635561 | 22..213 | 97 | -> | Plus |
| 3L | 21635618..21635769 | 214..365 | 99 | -> | Plus |
| 3L | 21635987..21636127 | 366..509 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:05 Download gff for
FMO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21628474..21628661 | 22..213 | 97 | -> | Plus |
| arm_3L | 21628718..21628869 | 214..365 | 99 | -> | Plus |
| arm_3L | 21629087..21629227 | 366..509 | 96 | | Plus |
