FMO04927.5prime Sequence
789 bp (789 high quality bases) assembled on 2008-08-12
> FMO04927.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTCCTCCACTG
GCTTGTTCTGGTCGCCAGCGTCACCCTGATCTCGGCAGGATCTTCTCCGG
AGCGAATAGTGGGTGGCCACCCTGTGCTTATTTCAGAAGTTCCTTGGCAG
GCGGCTCTCATGTATTCGGAAAAATACATTTGCGGTGCAGTTATCTACAG
TGACAAGATCATTATAACAGCAGCCCACTGTGTTGAAAGACCCTTCGATA
CACTGTATTCCGTCAGAGTTGGATCCGTATGGAAAAACTTGGGTGGACAG
CACGCCAGGGTTGCTGTAATTCGGAAGCATGAAGACTACGTATCTTCCAC
CATTTTGTTCAACGATATAGCCGTAATTAGACTGGTGGACACTCTAATTT
TCAATGCCGAAGTAAGACCTATCCAACTGGCCGATAGTGCACCCGCAGCT
GGAACTGAAGCTTCGGTTTCTGGTTGGGGAGAAATCGGAATCCTCTGGCT
ACAACCTACATCTCTATTGAAAACCTCAGTGAAAATACTAGACCCGAATG
TTTGTAAGCGGTCCTATCAGTACATCACCAAAACTATGATTTGCGCCGCC
GCTCTCTTAAAAGATTCCTGTCATGGAGACTCCGGCGGACCTCTCGTCTC
CGGTGGCCAACTAGTTGGCATTGTCTCCTACGGCATTGGATGCGCCAATC
CGTTCTTTCCCGGAGTCTACGCCAATGTGGCAGAGCTGAAACCTTGGATC
TTAAATGCTATTGAACAGCTTGCAAGCTTTCTGGACCAT
FMO04927.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ser12-RA | 845 | CG17240-RA | 6..740 | 37..771 | 3660 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2250536..2251270 | 771..37 | 3660 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:54 has no hits.
FMO04927.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:56 Download gff for
FMO04927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..744 | 32..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:51 Download gff for
FMO04927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..738 | 37..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:00 Download gff for
FMO04927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..744 | 32..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:00 Download gff for
FMO04927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2250532..2251281 | 20..776 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:56 Download gff for
FMO04927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2250532..2251281 | 20..776 | 98 | <- | Minus |
