Clone FMO04928 Report

Search the DGRC for FMO04928

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:28
Vector:pMK33-CFH-BD
Associated Gene/TranscriptZ600-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04928.5prime Sequence

324 bp (324 high quality bases) assembled on 2008-08-12

> FMO04928.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGTCGACAAA
TGAAACCAACCAAGTGCTGCAGCGCCTGAACAGCCTGAAAATCGTGGAAA
CCCCAAAGGAGCAGCATGAGTTCGGAAAACGCGAGTGCTACTCCCTGGAC
AGCAAGAAGTATTCCCTGGTACCAGCCACCCCCAGCAGCTCAGGACACGG
AAAGTTCCAAACCGAACTCAAAAAGCGCCGCAAAAACAAACTGAATCGCA
TGTACACTTACGAGGCTGATAAGAATTTCATCAAGGCTCGCAAATCTTTG
AACTTCGCAAGCTTTCTAGACCAT

FMO04928.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
Z600-RA 453 CG17962-RA 64..333 37..306 1350 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15509124..15509393 37..306 1350 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:35:00 has no hits.

FMO04928.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:02 Download gff for FMO04928.5prime
Subject Subject Range Query Range Percent Splice Strand
Z600-RA 56..336 29..310 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:22 Download gff for FMO04928.5prime
Subject Subject Range Query Range Percent Splice Strand
Z600-RA 56..336 29..310 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:03 Download gff for FMO04928.5prime
Subject Subject Range Query Range Percent Splice Strand
Z600-RA 56..336 29..310 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:03 Download gff for FMO04928.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15509129..15509396 42..310 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:02 Download gff for FMO04928.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15502229..15502496 42..310 99   Plus