FMO04929.5prime Sequence
475 bp (475 high quality bases) assembled on 2008-08-12
> FMO04929.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCATTTTTTCA
CCTGCTGTGCATTATTGTTAGTCGTCGTTACATTACCAACATGTTTCGTA
CAAGCAGGTCCCATTAAGGATCAATGCATGGCGGCGGCGGGCATCACAGC
ACAAGATGTTGCGAATCGTCATGAGACCGACGACCCTGGCCATAGTGTCA
AGTGCTTTTTCCGCTGTTTTCTAGAAAACATTGGCATTATCGCCGATAAC
CAGATAATACCCGGTGCTTTTGACCGAGTTCTAGGCCATATAGTTACCGC
GGAAGCCGTAGAGCGAATGGAAGCGACGTGTAATATGATTAAGAGCGAGA
CATCCCATGACGAGTCTTGTGAATTCGCCTGGCAAATCTCCGAGTGCTAC
GAAGGAGTAAGATTATCAGATGTTAAGAAGGGCCAAAGAACTCGAAATCA
CAGAGGAGCAAGCTTTCTAGACCAT
FMO04929.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56i-RA | 569 | CG30448-RA | 29..448 | 38..457 | 2100 | 100 | Plus |
| Obp56i-RB | 938 | CG30448-RB | 458..817 | 98..457 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19868234..19868593 | 98..457 | 1800 | 100 | Plus |
| 2R | 25286936 | 2R | 19868116..19868178 | 38..100 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:37 has no hits.
FMO04929.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:44 Download gff for
FMO04929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56i-RA | 29..453 | 38..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:12 Download gff for
FMO04929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56i-RA | 1..423 | 38..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:29 Download gff for
FMO04929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56i-RA | 29..453 | 38..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:29 Download gff for
FMO04929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19868116..19868175 | 38..97 | 100 | -> | Plus |
| 2R | 19868234..19868598 | 98..462 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:44 Download gff for
FMO04929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15755621..15755680 | 38..97 | 100 | -> | Plus |
| arm_2R | 15755739..15756103 | 98..462 | 99 | | Plus |
