FMO04930.5prime Sequence
429 bp (429 high quality bases) assembled on 2008-08-12
> FMO04930.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAAGTATTCCT
GTTGTTCATTTTCATCTCTGCTATCTGGCTCCAAGCATTTTGTATGAAAT
CTTCTGAAAAAATAAAAGCCTGCTTGAAACGGCAGCTGGGGTATACAATT
ACAGAAAATACAAAATTTGATGCTAAAGAAGACTCTCTTCAAAGCAAGTG
TTTTTATCACTGCTTACTGGAAGTGAAAGGTGTTATTGCAAATGATGCGA
TCAGTTCGGAGCAACCGAGGAAAGTACTTGAAAAAAAGTATGGCATTACT
GACACAGATGAATTGGAAAAGGCTGAAGAAAAGTGTCATTCCATCAAGGC
TTCAGGAAAATGTGAATTGGGCTACGAAATCTTGAAATGCTATCAGTCCA
TTACCAAGCATGCAAGCTTTCTAGACCAT
FMO04930.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56f-RA | 528 | CG30450-RA | 25..399 | 37..411 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19713532..19713847 | 96..411 | 1580 | 100 | Plus |
| 2R | 25286936 | 2R | 19713419..19713478 | 37..96 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:55:25 has no hits.
FMO04930.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:01 Download gff for
FMO04930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56f-RA | 20..406 | 32..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:24 Download gff for
FMO04930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56f-RA | 1..378 | 37..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:55 Download gff for
FMO04930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56f-RA | 20..406 | 32..419 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:55 Download gff for
FMO04930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19713412..19713478 | 26..96 | 92 | -> | Plus |
| 2R | 19713533..19713854 | 97..419 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:01 Download gff for
FMO04930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15600917..15600983 | 26..96 | 92 | -> | Plus |
| arm_2R | 15601038..15601359 | 97..419 | 98 | | Plus |
