Clone FMO04932 Report

Search the DGRC for FMO04932

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:32
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTotX-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04932.5prime Sequence

480 bp (480 high quality bases) assembled on 2008-08-12

> FMO04932.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGGCTTTCTAT
TGGCAGCTTGCTAATATGCGTGTTCTTAGGCATAGTTCCTTTTGCAACTG
CTAACACAAACAGTTCAAGTTATGAGGAACACAGGAATTATTTGCTTAAC
ATCTTTCACAATCCATTTGTGAATGACTCCATTAAGGAGAAAAATATTCC
GCAGCTAATCGCTTTTTATCAACGATATCCTACAGATGTTCCTCTATCCG
ACGCAGACAGGCAACAATTTGAAAGGTTTATTCATGATTACAGAGAATAC
CGGGCAGTTTTGGTTGATGGTGCACCACCTCAAGGAGGATCATTTGGAAA
CATATTTGGACACTTCCTAGGCAGAGTCGGAACCCGGTATATTTCGTCTC
TGTTTAATAAGAAAAGGGAGGAAAGGAAATCCAACCATGCATACATAATC
GAGGACTATAACGCAAGCTTTCTAGACCAT

FMO04932.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
TotX-RA 602 CG31193-RA 31..456 37..462 2130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20905063..20905488 462..37 2130 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:53:08 has no hits.

FMO04932.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:53 Download gff for FMO04932.5prime
Subject Subject Range Query Range Percent Splice Strand
TotX-RA 23..463 30..470 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:53 Download gff for FMO04932.5prime
Subject Subject Range Query Range Percent Splice Strand
TotX-RA 23..463 30..470 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:10 Download gff for FMO04932.5prime
Subject Subject Range Query Range Percent Splice Strand
TotX-RA 23..463 30..470 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:10 Download gff for FMO04932.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 20905056..20905492 30..470 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:53 Download gff for FMO04932.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16730778..16731214 30..470 98   Minus