FMO04933.5prime Sequence
717 bp (717 high quality bases) assembled on 2008-08-12
> FMO04933.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCAACCA
GGAGACCCAGGTTTCCAGCCTGCCGATGCCGCCGGAGCGGTACATCGCCA
ATTACACGGACGAGAATATCCGCCGCAACCGAGCGCCACGCCCACCGCCG
CCGCCGGCGCAGCACGAAGTCTATAGCATGTTTGGCATCCAGTACAACAA
CGACGAGATGATCCGCAGCTTGGAGTCCCAGAATATTAAGCGACTGATCC
CCATCCATTTCGATCGGCGCAAGGAGCTCAAGAAGCTTAACCACTCCCTC
TTGGTCAACTTCCTAGATCTCATTGACTTTCTTATCCTGAATCCTGACAG
CCCGCGGCGCACGGAAAAGATTGACGATATCAGTCTGCTGTTCGTCAACA
TGCATCACCTCCTCAATGAATTTCGCCCACATCAGGCGAGGGAAACGCTG
CGCGTCATGATGGAAATGCAGAAGCGGCAGCGCGTTGAGACCGCCGCCCG
TTTCCAAAAGCACTTGGAACGTGTGCGCGAGATCGTTAATACCGCCTTCT
CAGCTCTGCCGGTTCTAGATGATGACGACGATAGCGGCGGAGCAAAGATT
AAGACGGAGGTGGATCCGTTGGAGGCGAATGCGGCGGCCAAGAATGATCC
CAGTTACCAGCACGATCGCATGTTGTGCAAGCTTGTGGACGCTATCGAGG
CAAGCTTTCTAGACCAT
FMO04933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED7-RA | 901 | CG31390-RA | 100..759 | 40..699 | 3300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10760213..10760544 | 699..368 | 1660 | 100 | Minus |
| 3R | 32079331 | 3R | 10760604..10760933 | 369..40 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:09 has no hits.
FMO04933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:44 Download gff for
FMO04933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED7-RA | 95..765 | 31..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:26 Download gff for
FMO04933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED7-RA | 1..666 | 40..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:24 Download gff for
FMO04933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED7-RA | 95..765 | 31..706 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:24 Download gff for
FMO04933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10760207..10760542 | 370..706 | 99 | <- | Minus |
| 3R | 10760604..10760938 | 31..369 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:44 Download gff for
FMO04933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6585929..6586264 | 370..706 | 99 | <- | Minus |
| arm_3R | 6586326..6586660 | 31..369 | 98 | | Minus |
