FMO04934.5prime Sequence
443 bp (443 high quality bases) assembled on 2008-08-12
> FMO04934.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATGCCTCC
ATTTCTCTACTATGCCTTGCCCTGCTCCTGATTAGTCCTTTTTGCTTGGG
CTATTCTGACGAGGAAAGGGAATCTGACAGCCTTAGGGTTGCAGAAATTA
TTCGAACCTCCAACGACGCCGAATCGAAGATCAATCGAACCCAAGAGCTG
CTCGATATCTTTAGGCGCCTGACTCCCACGTTGTCCCCTGAACAAAGGGA
AAAGATTGAAAGATCCATTCAGGAGCATACTGATGAAATTCTAATCGATG
GAGTTCCGAGTCAGGGGGGGCGAAAGACCAAGTACGTCGGAAAAATCCTA
TCTCCAGTGGCACAAGGCCTTGCAGTTGGATTCTTTGAAGAACTCGGTGG
CAGCCTTTCCAGGCTCTTTACTGGAGCAAGCTTTCTAGACCAT
FMO04934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotC-RA | 530 | CG31508-RA | 45..431 | 39..425 | 1935 | 100 | Plus |
| TotA-RA | 579 | CG31509-RA | 66..395 | 63..392 | 390 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20873118..20873481 | 62..425 | 1820 | 100 | Plus |
| 3R | 32079331 | 3R | 20871187..20871516 | 63..392 | 390 | 74.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:35 has no hits.
FMO04934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:51 Download gff for
FMO04934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotC-RA | 45..434 | 39..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:48 Download gff for
FMO04934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotC-RA | 45..434 | 39..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:07 Download gff for
FMO04934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotC-RA | 45..434 | 39..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:07 Download gff for
FMO04934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20873032..20873054 | 39..61 | 100 | -> | Plus |
| 3R | 20873118..20873484 | 62..429 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:51 Download gff for
FMO04934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16698754..16698776 | 39..61 | 100 | -> | Plus |
| arm_3R | 16698840..16699206 | 62..429 | 99 | | Plus |
