FMO04937.5prime Sequence
1025 bp (263 high quality bases) assembled on 2008-08-12
> FMO04937.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAGTGGCATT
CTACATACCCGATCAGGCGACTCTGTTGCGGGAGGCGGAGCAGAAGGAGC
AGCAGATCCTTCGCTTGCGGGAGTCACAGTGGAGATTCCTGGCCACCGTC
GTCCTGGAAACCCTGCGCCAGTACACTTCATGTCATCCGAAGACCGGGAA
AAAAAGTCCGGCAAATATCGCAAGCCATCGCAAGCAAGCTTTTCTAGACC
CATTTCGTTTTGGGGGCGGGGGGCCCAGGGTAAAGTGGGTCCTTAATCAT
AATTCATAATCCATAATCCTTAATCCCCAACTTAGCCCTAAGAAAATCCC
TGGGCCATGAACTAGGGGCTTGGGAATTCCCCCCCCAAATAAAAAAAACG
CCCCGGGGGGGGAAACCCGAAGGGTTTTTTGAAAAAAAATCCCCAAAATG
GGATTTTTTGAAAGGGCCTTTTTACCGGGGATTTTTTTCCAAAAGGGGGA
TCCCCAAGGCAGAACCTTCCAAAATTTCAAAATTTTTCCCCCCCCCGCCC
CCCTGGGCCCCTTTTTTTTTCCAAAAAAAATTTTTTTTTTATTTTTTTTT
TTAGGCACTTTTTTTGGGGGAAAAAATGGGGAAAAACCCCCTTTCCCCAA
AAAAGGGGGGGGGTGGGACGAAAAAAACCCTGAAAATCCCCCCCCCGGGG
GGGGTATTCTCCCACCCCCCCTTTTTGTGCCCCCCCCCTTTTTGGGGGAA
AAAAAAAAAAAAAATCGGCCCCCCCCCGGGGGGGGGAAAAAAAAAAAGAG
GGCGGGGGGGCGAGAAAAAAAAAAAAACTATTTTTTTCTCCCCCCCATAT
TTTTTGTTGGGGCGGCCCCCTCGCCCTATTACAAAAAAAAAAATAATTGA
AAATTTTGCTACAAAAGAAAAAACATCCCCCCCCCCCAGTCCGGGGGGTG
ATGATGTTCTTGTCGAAAATAGAAAAAAAAAAAACATCATTATTTCGTTT
TTTTTTTTTTCAACAAAAAAAAACC
FMO04937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rpr-RA | 901 | CG4319-RA | 201..395 | 37..233 | 930 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18398041..18398235 | 233..37 | 905 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:46 has no hits.
FMO04937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:53 Download gff for
FMO04937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 29..241 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:14 Download gff for
FMO04937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 164..371 | 29..241 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:46 Download gff for
FMO04937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 29..241 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:46 Download gff for
FMO04937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18398041..18398240 | 29..233 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:53 Download gff for
FMO04937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18391141..18391340 | 29..233 | 96 | | Minus |
