FMO04939.5prime Sequence
385 bp (385 high quality bases) assembled on 2008-08-12
> FMO04939.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCCAAAACAA
AGAAGAAGGATTCGTCCTCAGATAGCGATAGCGGTCCAGATGATCGTATC
AAGCCGGCAAGCAAGAAGGCGAAGGAATCTGATGCTCCAAATTCAGATCC
AAAAGATTCGGGCGAAAATGGTGCTACATCTTGGACCCTGGAAGGACTTC
GCCAGGTGCGAATCAACGAGTTCCGCGGTCGCAAATCGGTGGACATTCGA
GAGTTCTACGATAAGGGCGGCCAAATTCTTCCCGGCAAGAAGGGCATCTC
CCTATCTTTAATTCAATGGAAGAAACTCCTTGAAGTGGCCGAAGAAGTCA
CCCGCGCGATCGAGAATGCAAGCTTTCTAGACCAT
FMO04939.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ssb-c31a-RA | 536 | CG8396-RA | 100..429 | 38..367 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8211559..8211831 | 95..367 | 1365 | 100 | Plus |
| 2L | 23513712 | 2L | 8211446..8211502 | 38..94 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:12 has no hits.
FMO04939.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:46 Download gff for
FMO04939.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ssb-c31a-RA | 100..434 | 38..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:28 Download gff for
FMO04939.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ssb-c31a-RA | 84..418 | 38..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:26 Download gff for
FMO04939.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ssb-c31a-RA | 100..434 | 38..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:26 Download gff for
FMO04939.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8211559..8211836 | 95..375 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:46 Download gff for
FMO04939.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8211559..8211836 | 95..375 | 98 | | Plus |
