FMO04943.5prime Sequence
471 bp (471 high quality bases) assembled on 2008-08-12
> FMO04943.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTTGAAATTAGGAAA
GTTTCTGGCACAAAATGCCACGTTGGTCAATCTGGTGGGCAGACAGCAGC
TGGGAACCGTCAGCCGCCTCTATTCAGCTGCCCCGGAGTCGTCCGACTTG
GATCTGCCGATCGACATAAAGAATCCCTATGAAAAGGACCCCCAGCAGTG
CATCCTATGCAAGCACAGCATCGAGCCGCACTACAAGAACGTGAAGCTGC
TCTCCCAATTCCAATCGCCATACACGGGTCGCATTTACGGGCGTCACATC
ACCGGATTATGCAAGCGCCGGCAGGAGCAAGTGGAGCAGGCCATTCTGCG
TGCCCAGCAGTGCCTGCTGATGCCGGGATACCACAAGGACCTCGACTTCC
TGCAGGACCCCAAGCTCTTTGATCCCGAGCGGCCCGTTCGCCCACACAAG
TACGCAAGCTTTCTAGACCAT
FMO04943.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS18C-RA | 528 | CG9688-RA | 38..458 | 33..453 | 2105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30424100..30424486 | 67..453 | 1935 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:54 has no hits.
FMO04943.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:23 Download gff for
FMO04943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS18C-RA | 38..467 | 33..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:32 Download gff for
FMO04943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS18C-RA | 1..423 | 34..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:48 Download gff for
FMO04943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS18C-RA | 38..467 | 33..464 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:48 Download gff for
FMO04943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30424011..30424045 | 33..67 | 100 | -> | Plus |
| 3R | 30424101..30424495 | 68..464 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:23 Download gff for
FMO04943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26249733..26249767 | 33..67 | 100 | -> | Plus |
| arm_3R | 26249823..26250217 | 68..464 | 98 | | Plus |
