FMO04945.5prime Sequence
326 bp (326 high quality bases) assembled on 2008-08-12
> FMO04945.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGAATTG
CAGGAATTCAACCAGGCGGCCGAAGATGTTAAGAACCTAAACACCACACC
CGGGGACAATGACCTTTTGGAGCTCTACAGCTTGTACAAACAGGCCACTG
TGGGGGATTGCAATACAGATAAGCCCGGCTTTCTGGACTTCAAGGGCAAG
GCCAAGTGGGAGGCGTGGAACAACCGCAAGGGAATGAGCAATACCGACGC
CCAGGCCGCCTACATTACCAAGGTCAAGGCACTGATCGCTGCCGTTGGCC
TGAAGTCAGCAAGCTTTCTAGACCAT
FMO04945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8498-RB | 525 | CG8498-RB | 128..397 | 39..308 | 1350 | 100 | Plus |
| CG8498-RA | 491 | CG8498-RA | 94..363 | 39..308 | 1350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8161924..8162071 | 308..161 | 725 | 99.3 | Minus |
| 2L | 23513712 | 2L | 8162123..8162240 | 168..51 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:01:18 has no hits.
FMO04945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:00 Download gff for
FMO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8498-RA | 94..363 | 39..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:34 Download gff for
FMO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8498-RA | 65..334 | 39..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:26 Download gff for
FMO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8498-RA | 94..363 | 39..308 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:26 Download gff for
FMO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8161924..8162063 | 169..308 | 100 | <- | Minus |
| 2L | 8162123..8162237 | 54..168 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:00 Download gff for
FMO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8161924..8162063 | 169..308 | 100 | <- | Minus |
| arm_2L | 8162123..8162237 | 54..168 | 100 | <- | Minus |
