FMO04946.5prime Sequence
249 bp (249 high quality bases) assembled on 2008-08-12
> FMO04946.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTATCTGAT
GTACACAATTAACGAAAACGGCGATCGCGTTTACACCCTGAAGAAACGCA
CCGAGGATGGTCGTCCCACACTATCTGCTCATCCAGCACGTTTTTCACCG
GAGGATAAGTACTCCCGCCAGAGGCTGACCATCAAGAAGCGCTTTGGACT
GCTGCTCACCCAGAAGCCGGAGCCCATTTACGCAAGCTTTCTAGACCAT
FMO04946.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7637-RA | 316 | CG7637-RA | 61..252 | 40..231 | 960 | 100 | Plus |
| CG12935-RB | 918 | CG12935-RB | 883..918 | 231..196 | 180 | 100 | Minus |
| CG12935-RA | 1200 | CG12935-RA | 1165..1200 | 231..196 | 180 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10810620..10810759 | 231..92 | 700 | 100 | Minus |
| 2R | 25286936 | 2R | 10810823..10810876 | 93..40 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:21:55 has no hits.
FMO04946.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:48 Download gff for
FMO04946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7637-RA | 61..257 | 40..237 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:54 Download gff for
FMO04946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7637-RA | 15..211 | 40..237 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:38 Download gff for
FMO04946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7637-RA | 61..257 | 40..237 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:38 Download gff for
FMO04946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10810615..10810757 | 94..237 | 98 | <- | Minus |
| 2R | 10810823..10810876 | 40..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:48 Download gff for
FMO04946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6698328..6698381 | 40..93 | 100 | | Minus |
| arm_2R | 6698120..6698262 | 94..237 | 98 | <- | Minus |
