FMO04947.5prime Sequence
344 bp (344 high quality bases) assembled on 2008-08-12
> FMO04947.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACGCGCAT
TCCACAGCCGTCGCAGGCATAGATATGGAACTGGACTTCGGCGAGGACAT
GGATGAGCACGGAGAATTGGAGAAAGTGGGTCAGCCTGAGAATTTGGTAG
CGATGGTGCTGCGCCTGCAGGCGAACCACGTGTGGATCCGGGAGCAGCTG
ACTCACCTACAGCGCCGCCTGGTGACCCTTCGGCTGGACAAGCAAAGAAG
CTTATACGAGGGAAAGGAGCGGTTACAGCGACTCCTGCTGAGCTTGCAGG
TGAAACACGGACGCCACTGGGCACTGGCAAGCTTTCTAGACCAT
FMO04947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12589-RC | 1814 | CG12589-RC | 1394..1681 | 39..326 | 1440 | 100 | Plus |
| CG12589-RB | 471 | CG12589-RB | 51..338 | 39..326 | 1440 | 100 | Plus |
| CG12589-RA | 517 | CG12589-RA | 97..384 | 39..326 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5137190..5137477 | 326..39 | 1440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:55:28 has no hits.
FMO04947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:03 Download gff for
FMO04947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12589-RA | 85..384 | 29..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:42 Download gff for
FMO04947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12589-RA | 1..291 | 39..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:57 Download gff for
FMO04947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12589-RA | 85..384 | 29..326 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:57 Download gff for
FMO04947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5137190..5137489 | 29..326 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:03 Download gff for
FMO04947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 962912..963211 | 29..326 | 99 | | Minus |
