FMO04948.5prime Sequence
256 bp (256 high quality bases) assembled on 2008-08-12
> FMO04948.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCAGCGGGTC
GAGTGGCTGGCAAGGCCGGCTACTCCAATCACTACTACAATGGACGCTCC
TATGTGGGCATCAACGAGGAGATCATGTGGGTAAGCATCGGCATGGGCGT
GACCATAGTGCTCCTGATCACGATCGCCTTGTGCTACATTGCGCGCGAGA
AGTGCCAGAAGAGGCAGCGGGAGTACTACGTGACCGCAGCAAGCTTTCTA
GACCAT
FMO04948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12994-RA | 1165 | CG12994-RA | 426..626 | 38..238 | 1005 | 100 | Plus |
| CG17193-RC | 3568 | CG17193-RC | 269..386 | 108..228 | 265 | 81.8 | Plus |
| CG17193-RB | 3915 | CG17193-RB | 616..733 | 108..228 | 265 | 81.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17422859..17423005 | 238..92 | 735 | 100 | Minus |
| X | 23542271 | X | 17423071..17423126 | 93..38 | 280 | 100 | Minus |
| 3R | 32079331 | 3R | 20039616..20039720 | 212..108 | 240 | 81.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:31 has no hits.
FMO04948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:53 Download gff for
FMO04948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12994-RA | 419..631 | 29..246 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:11:56 Download gff for
FMO04948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12994-RA | 419..631 | 29..246 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:31 Download gff for
FMO04948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12994-RA | 419..631 | 29..246 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:31 Download gff for
FMO04948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17422854..17423004 | 93..246 | 97 | <- | Minus |
| X | 17423072..17423133 | 29..92 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:53 Download gff for
FMO04948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17316887..17317037 | 93..246 | 97 | <- | Minus |
| arm_X | 17317105..17317166 | 29..92 | 93 | | Minus |
