FMO04949.5prime Sequence
337 bp (337 high quality bases) assembled on 2008-08-12
> FMO04949.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTTCTGCTAC
TGGTGCACCTGCGGCGCCTTATTTTGCTGCTGACGGTCGTTTACCTGAGC
GGAGCGGTATTCCGTCGCCTTCTCACCGAACGGCACCACGCCCACATCCT
GCAAGGCAATGGTTACATGGGTTTCGGACGTCTTCGTGGTGGCGGTGGAT
CCAAGGAGCCGTATCACTTCCAATGGTGGGCCTACATCTACACCTGTTAT
GCATACGCCGTGCTGGTCAACTACGTCAACATGCGCCGGCTGACCAACCT
TATCGAATTTTTCTTGAATGCAAGCTTTCTAGACCAT
FMO04949.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13306-RA | 531 | CG13306-RA | 111..392 | 38..319 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8749278..8749559 | 319..38 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:05 has no hits.
FMO04949.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:06 Download gff for
FMO04949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 38..327 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:37 Download gff for
FMO04949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 38..327 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:07 Download gff for
FMO04949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 38..327 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:07 Download gff for
FMO04949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8749270..8749559 | 38..327 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:06 Download gff for
FMO04949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8742370..8742659 | 38..327 | 98 | | Minus |
