FMO04950.5prime Sequence
341 bp (341 high quality bases) assembled on 2008-08-12
> FMO04950.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACAATAAAC
AAGGAAACGGGAACCGATCCCGATCCTGGATATAAGCCTACGTTACGCAG
TCAAGATAAGGCCGCCCTGAAGGAACTGCTGCACACGCGTCTTGTGGAGT
GCGGATGGCACAAGGACATTAAGGAAATGATACGAAACATCATCATGGAG
CGCGGAGTGGACAATATAAACCGCGACCAACTGGCTGCCCAAATAGTCCC
GCAAGCTCGCGCTTTGGTGCCTGAAGTCGTCAAAAATGAGATGATGCTGC
GCGTGCACGCCGCCCTCGATAAGGCAAGCTTTCTAGACCAT
FMO04950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2b-RB | 662 | CG14612-RB | 189..474 | 38..323 | 1430 | 100 | Plus |
e(y)2b-RA | 559 | CG14612-RA | 86..371 | 38..323 | 1430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7094263..7094402 | 116..255 | 700 | 100 | Plus |
3R | 32079331 | 3R | 7094123..7094200 | 38..115 | 390 | 100 | Plus |
3R | 32079331 | 3R | 7094471..7094539 | 255..323 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:34 has no hits.
FMO04950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:57 Download gff for
FMO04950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2b-RA | 80..371 | 34..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:39 Download gff for
FMO04950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14612-RA | 1..288 | 39..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:59 Download gff for
FMO04950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2b-RA | 80..371 | 34..323 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:59 Download gff for
FMO04950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7094117..7094200 | 34..115 | 97 | -> | Plus |
3R | 7094263..7094401 | 116..254 | 100 | -> | Plus |
3R | 7094471..7094539 | 255..323 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:57 Download gff for
FMO04950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2919839..2919922 | 34..115 | 97 | -> | Plus |
arm_3R | 2919985..2920123 | 116..254 | 100 | -> | Plus |
arm_3R | 2920193..2920261 | 255..323 | 100 | | Plus |