FMO04953.5prime Sequence
299 bp (299 high quality bases) assembled on 2008-08-12
> FMO04953.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGAACCTGGGTG
CTGGAGGTGGCCAAGATGGGCATGTACATGGCCTTTCCGGTGACGCTATT
CCACTTGTTTAACCAGCCGGAATACTTTGAAGAATGGGTGACCAAGAAGA
AGCGGGAACTTTATCCGCCGGAAAGCAAAAGCCACCACGAGGAGCTGCAG
CGGGCAATCCGTGAACACCACGCCCAGCACGACGCCAAAATGATGCGTGC
TATGGAGGAGGCGGAGGGCAAGCAGAAGAAGGCAAGCTTTCTAGACCAT
FMO04953.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14483-RC | 955 | CG14483-RC | 108..357 | 32..281 | 1235 | 99.6 | Plus |
| CG14483-RB | 437 | CG14483-RB | 30..279 | 32..281 | 1235 | 99.6 | Plus |
| CG14483-RA | 515 | CG14483-RA | 108..357 | 32..281 | 1235 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17585793..17586042 | 281..32 | 1235 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:37 has no hits.
FMO04953.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:33 Download gff for
FMO04953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14483-RA | 102..357 | 24..281 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:45 Download gff for
FMO04953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14483-RA | 43..298 | 24..281 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:10 Download gff for
FMO04953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14483-RA | 102..357 | 24..281 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:10 Download gff for
FMO04953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17585793..17586048 | 24..281 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:33 Download gff for
FMO04953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13473298..13473553 | 24..281 | 98 | | Minus |
