FMO04954.5prime Sequence
313 bp (313 high quality bases) assembled on 2008-08-12
> FMO04954.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCATCTATC
ACGACGAGGTGGAGATCGAGGACTTCGAGTACGACGAGGAGGAGGAGATG
TACTACTATCCCTGTCCATGCGGCGATCGATTTCAGATCTCCAAGGAGGA
GCTAATCGAGGGCGAGGAGGTGGCCACCTGTCCCAGCTGCTCCCTAGTCA
TCAAGGTCATATACGATCCGGAGATGTTCAAAGCTGAGGAGGATGAAGAA
AGTGCGCTGAACGAGAAGCTCGGCGACCTGAAGCTCGAGAAGAACGCAAG
CTTTCTAGACCAT
FMO04954.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14701-RA | 487 | CG14701-RA | 105..363 | 37..295 | 1295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11232016..11232125 | 37..146 | 550 | 100 | Plus |
3R | 32079331 | 3R | 11232192..11232269 | 144..221 | 390 | 100 | Plus |
3R | 32079331 | 3R | 11232340..11232415 | 220..295 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:23 has no hits.
FMO04954.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:52 Download gff for
FMO04954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14701-RA | 102..366 | 34..299 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:54 Download gff for
FMO04954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14701-RA | 1..261 | 38..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:51 Download gff for
FMO04954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14701-RA | 102..366 | 34..299 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:51 Download gff for
FMO04954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11232194..11232268 | 146..220 | 100 | -> | Plus |
3R | 11232341..11232424 | 221..299 | 92 | -> | Plus |
3R | 11232013..11232124 | 34..145 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:52 Download gff for
FMO04954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7057735..7057846 | 34..145 | 99 | -> | Plus |
arm_3R | 7057916..7057990 | 146..220 | 100 | -> | Plus |
arm_3R | 7058063..7058146 | 221..299 | 92 | -> | Plus |