FMO04955.5prime Sequence
339 bp (339 high quality bases) assembled on 2008-08-12
> FMO04955.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTGGACGAGTCTAAT
TGTATCACTGCTCCTGGTCCACTGCCTGCTTGCCGGGGCCGCGCCTGCGC
TAAAGGATCTGGACGCGGGCACCTGGAGTGCGGATGAGGCGTGTCAGAAT
GTGGATAAATCGGTCATAATAGCGAACCAGAATGACTCCACATGCGTCAG
CTACGTCTATTGTTATAAAGTCAATGACTCAACGAGGGCTCTAATCAAAA
GCTGCAAGACCGGGCAATTCTTTGATGCCGATCTCAAATTCTGCACTATC
AGCAAACCAGCGGGATGTGTCGCAAGCTTTCTAGACCAT
FMO04955.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14957-RA | 423 | CG14957-RA | 17..304 | 34..321 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3187668..3187808 | 60..200 | 705 | 100 | Plus |
| 3L | 28110227 | 3L | 3187863..3187987 | 197..321 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:01:11 has no hits.
FMO04955.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:55 Download gff for
FMO04955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14957-RA | 5..307 | 21..325 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:03 Download gff for
FMO04955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14957-RA | 5..307 | 21..325 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:23 Download gff for
FMO04955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14957-RA | 5..307 | 21..325 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:23 Download gff for
FMO04955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3187669..3187808 | 61..200 | 100 | -> | Plus |
| 3L | 3187867..3187990 | 201..325 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:55 Download gff for
FMO04955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3187669..3187808 | 61..200 | 100 | -> | Plus |
| arm_3L | 3187867..3187990 | 201..325 | 98 | | Plus |
