FMO04956.5prime Sequence
310 bp (310 high quality bases) assembled on 2008-08-12
> FMO04956.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTACAACGCAG
GCTACCAGGTGGACGTGATCGATCCCTACTATCAGCCGCCCGTGGAGGTG
GTGAATGTTATTGGACCCCCGCCCCCCGTAGAGGTGATAATGCCCTCGCC
CGTTTACAACCAGCCGGTGGTTGTGGTGGAGCAACCCAGCTACAATCAGC
CAGGACCCCCCCAAGGACCCAGTGACGCCGAGTGCTGCATGCTGCTAGGA
GCCTGTTGTGTCATGGAGGAGTGTGGCCTGTGTGTCATCATGGCAAGCTT
TCTAGACCAT
FMO04956.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15127-RA | 624 | CG15127-RA | 116..370 | 38..292 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19681022..19681276 | 292..38 | 1275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:31 has no hits.
FMO04956.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:29 Download gff for
FMO04956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 31..300 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:18 Download gff for
FMO04956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 92..358 | 31..300 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:06 Download gff for
FMO04956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15127-RA | 110..376 | 31..300 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:06 Download gff for
FMO04956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19681016..19681282 | 31..300 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:29 Download gff for
FMO04956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15568521..15568787 | 31..300 | 97 | | Minus |
