FMO04957.5prime Sequence
648 bp (648 high quality bases) assembled on 2008-08-12
> FMO04957.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGCTACTTT
TACAATCCTGGTGCTCCAAGTGGTCATCTGTTTGGCTGGAGCGACTGAGT
ACCAGTTAACATTGGACAAAGATGGCTTGTTAGCACCATGCGAGAATCAG
CCCGGAAATCCTTCTGGTTTTGAAGCGATGGTGGATACTTCCTCCCTTAA
AGTACATAACCTTGGTTCGAAAGTTCGAATTGAAGGAGAGCAGAAAGTGG
TCTGGAAAGATGTCCAGCCTGGAGACACATTAAAGGTATTTGGTCAAGTC
TATCGCCTGGATAAGGGCACTTGGCAGAAGACTATGTTTACGGCCAGCTC
CAATAACTTTTGCAAAAACATGTTTGATAAGAACCAATACTGGTATAATT
TCTGGACAAAGTATATTAGCAACTCCGACGAGATTAAGGAAAAGTGCTTG
ACCACACCAGGGGCCGTTTTAAAGTACAAAGACTACGAACTGGACTTGAA
GACCAGCTTGAATGTTCCGAATCTGGATGGGCGCTACAAGCTGGTGGTCC
AAATAGAGGCCTTCGATAAGCGCAATGTAAGGCGCCCAGTTCCCATTTGC
ATAGAGTTCCGTGGAACTGCAGGACAGGTGGCAAGCTTTCTAGACCAT
FMO04957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheB42a-RA | 693 | CG33348-RA | 24..616 | 37..629 | 2965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6949505..6949754 | 37..286 | 1250 | 100 | Plus |
| 2R | 25286936 | 2R | 6949802..6949981 | 284..463 | 900 | 100 | Plus |
| 2R | 25286936 | 2R | 6950040..6950207 | 462..629 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:53:47 has no hits.
FMO04957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:26 Download gff for
FMO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB42a-RA | 18..616 | 31..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:20 Download gff for
FMO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB42a-RA | 18..616 | 31..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:00 Download gff for
FMO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB42a-RA | 18..616 | 31..629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:00 Download gff for
FMO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6949496..6949753 | 25..285 | 97 | -> | Plus |
| 2R | 6949804..6949980 | 286..462 | 100 | -> | Plus |
| 2R | 6950041..6950207 | 463..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:26 Download gff for
FMO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2837001..2837258 | 25..285 | 97 | -> | Plus |
| arm_2R | 2837309..2837485 | 286..462 | 100 | -> | Plus |
| arm_2R | 2837546..2837712 | 463..629 | 100 | | Plus |
