FMO04958.5prime Sequence
324 bp (324 high quality bases) assembled on 2008-08-12
> FMO04958.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGACAT
CTTCACGACACTGCCGAAACGTCGGTTGGTACCCAACCTACTTAAGTCCA
TTATAATGGTCCTGGAGCATACTAGCCGACCCATGACTGACACAGAGCTG
AACATCTTCCTGGGCAGCCAGTACCAACGTAACGATCCGGAATTCTTTGC
CCAAGTGCAAATCAATCTGCACGATGGCATCGAAAGCGCCATTCTGAGGC
GCCAGGGAAACCAGATTTCGCTGCTCGCTTGGATCCTCACCAAACCGATG
AACCTTGCAAGCTTTCTAGACCAT
FMO04958.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15578-RA | 415 | CG15578-RA | 98..366 | 38..306 | 1345 | 100 | Plus |
| CG15577-RA | 508 | CG15577-RA | 139..338 | 75..274 | 475 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4277596..4277864 | 306..38 | 1345 | 100 | Minus |
| X | 23542271 | X | 4276663..4276862 | 274..75 | 475 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:03 has no hits.
FMO04958.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:04 Download gff for
FMO04958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15578-RA | 98..370 | 38..310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:35 Download gff for
FMO04958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15578-RA | 1..270 | 40..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:05 Download gff for
FMO04958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15578-RA | 98..370 | 38..310 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:05 Download gff for
FMO04958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4277591..4277870 | 26..310 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:04 Download gff for
FMO04958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4171624..4171903 | 26..310 | 96 | <- | Minus |
