Clone FMO04967 Report

Search the DGRC for FMO04967

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13473-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04967.5prime Sequence

471 bp (471 high quality bases) assembled on 2008-08-12

> FMO04967.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTGCCATGCA
GAAGAAGGTCATCATTGTGGATTCGAAGAGTTACTTTGATAAGCTCATCG
ATGATGCGGGAACCAACAAATACGTACTTGTCGAGTTCTTCGCCACCTGG
TGTGGTCCTTGCGCGATGATTGGTCCCCGCTTGGAGCAACTGGCATCGGA
TTACTTCGGACGGATGTTGGTCCTTAAGATTGACGTTGATGAGAACGAAG
ATCTGGCCGTTCAGTACGAAGTCAACAGCATGCCCACATTTCTGATCATC
AAAAACCGAGTGACACTAATCCAGTTCGTGGGCGGCAATGTCGAAAGGGT
CGTCAGCACGGTGGAGAAGTTTGTGGGCAAGGTGGAGGACTCCAAGGAGC
ACAAGTCGAAAGAGGGAGGTGCTAGTTCAGCTACCGTGCCGAAATTGGAA
CGCGCAAGCTTTCTAGACCAT

FMO04967.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13473-RA 584 CG13473-RA 81..497 37..453 2085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14728840..14729256 37..453 2085 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:54:51 has no hits.

FMO04967.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:48 Download gff for FMO04967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13473-RA 79..506 33..462 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:23 Download gff for FMO04967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13473-RA 1..420 37..457 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:32 Download gff for FMO04967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13473-RA 79..506 33..462 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:32 Download gff for FMO04967.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14728838..14729265 33..462 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:48 Download gff for FMO04967.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14721938..14722365 33..462 98   Plus