Clone FMO04969 Report

Search the DGRC for FMO04969

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:69
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12691-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04969.5prime Sequence

506 bp (506 high quality bases) assembled on 2008-08-12

> FMO04969.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTGCACAGC
AGCTACAATCGCGCACCGCGCCGCAAACTCATTCCGAATTTGTTTAGCAA
CATCCTACAGGTGATCGCCGATGCCGACCATCCGCTCACCGAACCCGAGA
TCATGGACGCGGTCGCCGATCGGTTGGATCGCAGCGACGAGGAGCTGAAG
CGCCAGATCACAGTAAGCCTCCACGACGCCCTAATCTACGGCTATCTGCG
AGTGAAGAACTATCGTTACTCGATAGTGCCCAGTCGCCTGGATCCGGACG
AACATCGCGATCATAACGAGCCCAGTTCCTCCATCACCGCCGCCCCGGAA
CATAGTCGGCTGCAGGAGAGGATCTCGAGTGGAACCAGTGCTGCCATGGT
TGACAACCAGGGTCGCGATGAAGAACTCACACCAAAAAGCACTCAGGCGC
TAAAGAGGTTAAATGCTGAGCCGCAAGGGCAAACTAATGCAAGCTTTCTA
GACCAT

FMO04969.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG12691-RA 573 CG12691-RA 64..513 39..488 2250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4266160..4266609 39..488 2250 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:53:10 has no hits.

FMO04969.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:55 Download gff for FMO04969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12691-RA 53..513 31..488 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:53 Download gff for FMO04969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12691-RA 1..453 39..491 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:12 Download gff for FMO04969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12691-RA 53..513 31..488 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:12 Download gff for FMO04969.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4266159..4266609 33..488 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:55 Download gff for FMO04969.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4160192..4160642 33..488 98   Plus