FMO04970.5prime Sequence
524 bp (524 high quality bases) assembled on 2008-08-12
> FMO04970.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCAGTTCG
AGCAAGAACAAGACCCTACAGCTGATAAGGTGCTTCTGCGGATGCAGTAA
CATGACTGTCGCCGAGGTGCGGAGGATCTATGTTCTGTCGAACAGTGTGC
ACGAGACGCTGCTGGATGCGGAGGCCACCAGACTGCTGCGCAAGTTCATG
GAGACGAGGCGGTCCGGCGACAAGGACGAGGCCGAGCAGTACTTGGACAT
CTACGAGAAGTGCGCCGAGTTTCTCGCTGAGCACCAGCGCACCTTCACCC
AGGACGAGGTGGACGAACTGGTCGATCTGGGCCTGCCCTACGACCTGGAG
CAGGATCTCTCCAGGCGCATGCTCAGCGCCGATCGCACGGACATCAGCAG
CGGGCTCTATCGCATCCAGAGCAAATGTCGCAACGAAATCGAGGGCAGCA
GCGATTTTCGAGACTTCAGGGACGCCATCGCTGATAAGATGCGTCGGGTG
CCAAAAGCAAGCTTTCTAGACCAT
FMO04970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12883-RA | 976 | CG12883-RA | 115..590 | 31..506 | 2365 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27679499..27679950 | 55..506 | 2260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:54:07 has no hits.
FMO04970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:31 Download gff for
FMO04970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12883-RA | 112..590 | 28..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:21 Download gff for
FMO04970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12883-RA | 112..590 | 28..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:08 Download gff for
FMO04970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12883-RA | 112..590 | 28..506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:08 Download gff for
FMO04970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27679402..27679430 | 28..56 | 93 | -> | Plus |
| 3R | 27679501..27679950 | 57..506 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:31 Download gff for
FMO04970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23505124..23505152 | 28..56 | 93 | -> | Plus |
| arm_3R | 23505223..23505672 | 57..506 | 100 | | Plus |
