FMO04971.5prime Sequence
532 bp (532 high quality bases) assembled on 2008-08-12
> FMO04971.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATAAACGAAA
TGTTCAATGGTAACAACGATGATAGCTCTGCACCGGAACCGGAACCGGAA
CCATCACACGCGAAACCCAATACATATTCAAATAAGAAGGCAAACACTAA
AGAGGACGAAAAGAGGCAATTCCTGAACACGCTGGTCAAGCTTTGTAAAT
CAGAAACAGAAAAGGGATTTGTAAATCCCAAACAAACCATCAGTAATATT
AACACGATCACGAACAACATCAGCATGCCGGAAATTCAATTGCCACCGAT
TACGGTTGTCATCGTGAAGGATGAAAAGGAGCTGGCCAAATACCAAGAGA
AATCTAAAAACGGGGCCATAATAATCAAACGTCGTAGCAACGCCAAGGAG
GATACCAAACCTGCACCCAGAACGGGGTTGCAAGAAAGGACTAAGAAAGG
ATTGAGTGCGGGCATTAAGAAGTGCGTCCTTATGAAAATCAAAGAACTTA
ATGTTATAAAAGCGGCAAGCTTTCTAGACCAT
FMO04971.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11112-RC | 676 | CG11112-RC | 159..635 | 38..514 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7400965..7401441 | 38..514 | 2385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:43 has no hits.
FMO04971.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:37 Download gff for
FMO04971.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11112-RC | 154..638 | 29..518 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:48 Download gff for
FMO04971.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11112-RC | 110..594 | 29..518 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:14 Download gff for
FMO04971.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11112-RC | 154..638 | 29..518 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:14 Download gff for
FMO04971.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7400960..7401444 | 29..518 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:37 Download gff for
FMO04971.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3288465..3288949 | 29..518 | 98 | | Plus |
