FMO04976.5prime Sequence
462 bp (462 high quality bases) assembled on 2008-08-12
> FMO04976.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCAGATCGGC
AAAGGGCTTTGGTCGTTTAATCAATCCGGGCGTGGTACTCCATCCGGAAC
TGCATCAAAAGATGGCCGACTTTGAGGCCATGACCATCGAGCGATCTGAT
TTGGATCACGAATTGAGCCGATTGCGCAAGCAGCAGGACGATACCGAGGA
TAATTTGGCAGAGGCGCTGGCCGAGGACGAGTTCCAGTGCAATTTGAGTG
GCCAGCCATTCGTTGCTCCCAACGAGGACGAGCTGCAGGAAATTCTGAGG
AATCACCTCGGTAGCATTATCAACAAGCTGGCTGCCACGTACGAGCGCCT
TATTTACCTGGATGCGGACATCAGGAAGCTGAAGGGAGTCATTGAAAAGG
CCATCACAGTGGCTAATGAGGAATCGGCAGCAGCCGCCTCAATGGCAAGC
TTTCTAGACCAT
FMO04976.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14071-RC | 585 | CG14071-RC | 76..483 | 37..444 | 2040 | 100 | Plus |
| CG14071-RB | 1225 | CG14071-RB | 150..557 | 37..444 | 2040 | 100 | Plus |
| CG14071-RA | 659 | CG14071-RA | 150..557 | 37..444 | 2040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10888371..10888778 | 444..37 | 2040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:53:13 has no hits.
FMO04976.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:57 Download gff for
FMO04976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 145..569 | 29..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:55 Download gff for
FMO04976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 121..545 | 29..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:15 Download gff for
FMO04976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 145..569 | 29..456 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:15 Download gff for
FMO04976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10888359..10888783 | 29..456 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:57 Download gff for
FMO04976.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10888359..10888783 | 29..456 | 98 | | Minus |
