FMO04979.5prime Sequence
491 bp (491 high quality bases) assembled on 2008-08-12
> FMO04979.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCAGAAACAAT
CGCTCGAGAAAGCGTCGTGATGAAATGAATAAGATAAAGAAGGCGCGGTA
CGAAGCCAAGGAGTTAATTCGACTGAAGAAAACTCTGGGACTCCTAGATG
CCGATGGAAATGAGATCATGAAGGATATAAGCGATGTGGTCGAAATTAAG
ACCGCCAAGGAGCTCAAAAGGGAGGCCAAATCCAAGGAGGAGCAGGAATT
GATCTACGAGCACCAGGAGAGTCTGGAGAAGGGCGAGAAAGTCAAGGTGA
CCAACGAGAACACGGGCGTGGAGCACATTTTCAACAGCAAGACCCTCAAA
GATCAGTACGGCAATTATCCTGCGTGGTTCAAGAAGAAGAAGACCGCCAA
GCGTCTAAGAAAGAAGCAGCACTCGCAGAAGAAGAACTTCAAACAGGCCT
GGACCACGGTTAATGTTCCCCTAGCAAGCTTTCTAGACCAT
FMO04979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15019-RB | 764 | CG15019-RB | 86..527 | 32..473 | 2195 | 99.8 | Plus |
| CG15019-RA | 677 | CG15019-RA | 86..527 | 32..473 | 2195 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4405364..4405616 | 473..221 | 1265 | 100 | Minus |
| 3L | 28110227 | 3L | 4405784..4405974 | 222..32 | 940 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:38 has no hits.
FMO04979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:08 Download gff for
FMO04979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..530 | 32..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:53 Download gff for
FMO04979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RB | 86..530 | 32..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:37 Download gff for
FMO04979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15019-RA | 86..530 | 32..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:37 Download gff for
FMO04979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4405360..4405615 | 222..477 | 99 | <- | Minus |
| 3L | 4405785..4405974 | 32..221 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:08 Download gff for
FMO04979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4405360..4405615 | 222..477 | 99 | <- | Minus |
| arm_3L | 4405785..4405974 | 32..221 | 99 | | Minus |
