FMO04981.5prime Sequence
526 bp (526 high quality bases) assembled on 2008-08-12
> FMO04981.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCACAA
AATCGGATAATGCTGACTCAAAATCGGACAAATCAAAGGAATCACTAGAT
GACGCATGGGCAATCCGACCCTGTCATCTGTACAAGGAGGAGTACGACGA
CTGCACGAGTTTTAAGGCGCGCTTCCACCAGTACTTTATATTTGGCAAGG
ACACAGATTGCTCCCAATGGCTAACTGATTACCGTAACTGCGAACGATAT
CAGCAGTCCAACGGGAACGATGTGGCTGCCGGCAAAGCGGTGATTAAAAG
CGAGGAGGAGCGCCGAAGGATCCGCCTGCGCGCCCACTTTGCCAACGACA
CTTGGCAGAAGCGTAAGAAGCCACCGCTGGATTGGGCTGCTCCTCTGCCG
GACTGGATGGAGAAGCGAAACGAGAATACCTATCTTGAGCTTAAGCAAAA
AGAGCTCTCTGGACAGGCGGCGCCGCAAGGAGAGGAACGCTCGCTGTGCA
CGATCATGGCAAGCTTTCTAGACCAT
FMO04981.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15908-RA | 537 | CG15908-RA | 36..503 | 41..508 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6668309..6668704 | 113..508 | 1980 | 100 | Plus |
| 2R | 25286936 | 2R | 6668185..6668256 | 41..112 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:53:17 has no hits.
FMO04981.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:59 Download gff for
FMO04981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15908-RA | 23..508 | 29..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:57 Download gff for
FMO04981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9410-RD | 23..508 | 29..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:15 Download gff for
FMO04981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15908-RA | 23..508 | 29..513 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:15 Download gff for
FMO04981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6668309..6668709 | 113..513 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:59 Download gff for
FMO04981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2555814..2556214 | 113..513 | 99 | | Plus |
