FMO04983.5prime Sequence
477 bp (477 high quality bases) assembled on 2008-08-12
> FMO04983.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTGCAAGTGA
TATCGCGGGAATTGAACTCACCAGTGGACCGACTGGTCTGAAGAGCAGGA
TCCTTGTGAGAAACCTTCCGGTATGCACCCGCCAGGAGCTGGCTTACCTC
TGCTTGCCCTTCGGCGAAATCCTTGGCTCGCTGGTCACCAATAACCAGGG
GTTTATCCAGTTCGCTAGGGAGAGCGAGGCCAAGCTCGCCATAGAGACGC
TCGACCATACTACCTTCAAATCTAAGGTTATCCTTGTTTCGAACGCAAGC
TTCCGTTCGCTCAACGCCAGTTGCTTGGGCTATGCTCCCCCGGGGCAGAT
GATGATCGAGTGGTCTGATGAGGATGACGTCGATGAATACGATGATTACT
CCGAAAGTGATGACGAAGATGGCCCGGGAGACATGCAACTGTATAATGCT
AATTTTATAGCAAGCTTTCTAGACCAT
FMO04983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14628-RA | 489 | CG14628-RA | 35..457 | 37..459 | 2115 | 100 | Plus |
| fz3-RB | 2304 | CG16785-RB | 64..410 | 37..380 | 900 | 84.1 | Plus |
| CG18823-RA | 667 | CG18823-RA | 88..306 | 78..296 | 495 | 82.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1145678..1146100 | 37..459 | 2115 | 100 | Plus |
| X | 23542271 | X | 777797..778143 | 37..380 | 875 | 84.1 | Plus |
| X | 23542271 | X | 21152371..21152711 | 377..37 | 550 | 77.4 | Minus |
| X | 23542271 | X | 21163547..21163887 | 377..37 | 550 | 77.4 | Minus |
| X | 23542271 | X | 990605..990823 | 78..296 | 495 | 81.7 | Plus |
| U | 3151297 | U | 3102340..3102485 | 37..182 | 415 | 85.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:51 has no hits.
FMO04983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:12 Download gff for
FMO04983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14628-RA | 35..460 | 37..463 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:04 Download gff for
FMO04983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14628-RA | 35..460 | 37..463 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:21 Download gff for
FMO04983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14628-RA | 35..460 | 37..463 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:21 Download gff for
FMO04983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1145678..1146103 | 37..463 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:12 Download gff for
FMO04983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1039711..1040136 | 37..463 | 99 | | Plus |
