FMO04984.5prime Sequence
487 bp (487 high quality bases) assembled on 2008-08-12
> FMO04984.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGAACTC
GCAAGAAGGGACTCGAATTCGCTAAACACATCACCGAGATTATCAACAAG
TCAACGGGCTTTGAAAGTCACCTACAGAAGGTCAAGATCGTAGACGGTGG
CGATGGAGCCTGCACTGCTGAGCTAAAGGTGGACCAGGATCATGTGAACT
TGTACAAGTTTTTGCACGGCGGTTATATCATGACCCTGGTGGACTTGATA
ACCACCTACGCCCTAATGTCCAAGCCATGTCATCCCGGAGTTTCGGTAGA
TCTTAGTGTAAACTTTCTAAACGGCGCCAAACTGGGCGACGATGTGGTGA
TTCAGGCCAATCTGTCCAAGGTGGGCAAGTACCTTGCCTTCATCGATTGC
ACCCTGAAGCACAAGAAGGACGACTTGGTGATAGCCAAGGGCACACATCT
AAAGTATATCAAATTTGACGCAAGCTTTCTAGACCAT
FMO04984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16986-RB | 694 | CG16986-RB | 164..592 | 41..469 | 2145 | 100 | Plus |
| CG16986-RA | 769 | CG16986-RA | 164..592 | 41..469 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2601018..2601359 | 128..469 | 1710 | 100 | Plus |
| 3L | 28110227 | 3L | 2600870..2600961 | 41..132 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:06 has no hits.
FMO04984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:08 Download gff for
FMO04984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16986-RA | 164..592 | 41..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:27 Download gff for
FMO04984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16986-RA | 1..432 | 41..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:26 Download gff for
FMO04984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16986-RA | 164..592 | 41..469 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:26 Download gff for
FMO04984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2600870..2600959 | 41..130 | 100 | -> | Plus |
| 3L | 2601021..2601359 | 131..469 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:08 Download gff for
FMO04984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2600870..2600959 | 41..130 | 100 | -> | Plus |
| arm_3L | 2601021..2601359 | 131..469 | 100 | | Plus |
