FMO04988.5prime Sequence
368 bp (368 high quality bases) assembled on 2008-08-12
> FMO04988.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACAGCCCA
GTAAAACAGACCCTAAAACCCAAGAAGCTGGACAAACATCCAGGAACTCA
GAAGGTCGAGTTCAAAAAGGATATCATCGATGAGGTAGCGGATCAGTCGG
TTGAATACGATTACATGAAGTATCCCAGCAATAAAGAGAAGGCAAAACTC
CTGAAAGGCGTTAAACCATCGAAAAGTGTCACATTCAAGACGGTGGTGGA
GCTGGTGACCTATTCGGAAAACTGGAAGATGAAGATGAGCGAGAGCAGGC
TGCGCTCGGAGGATGAGCAGCTGAAGAGCTCCCAAAAATATCGCAACTAC
GCAAGCTTTCTAGACCAT
FMO04988.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15705-RA | 465 | CG15705-RA | 71..384 | 37..350 | 1540 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16281020..16281303 | 37..320 | 1390 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:01:27 has no hits.
FMO04988.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:06 Download gff for
FMO04988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 66..395 | 30..360 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:56 Download gff for
FMO04988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 66..395 | 30..360 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:29 Download gff for
FMO04988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 66..395 | 30..360 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:29 Download gff for
FMO04988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16281015..16281303 | 30..320 | 97 | -> | Plus |
| 2R | 16281519..16281559 | 321..360 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:06 Download gff for
FMO04988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12168520..12168808 | 30..320 | 97 | -> | Plus |
| arm_2R | 12169024..12169064 | 321..360 | 92 | | Plus |
