FMO04990.5prime Sequence
537 bp (537 high quality bases) assembled on 2008-08-12
> FMO04990.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGACAGCA
GCTGCTGGACGAGGAGTTCGAGAATCTGCGTCGCGTAGCGCTGGCCATAT
GCGAGAATCTCGGGAGACCAAAAGATCGGGAGATATGTCGAAGCACTCTA
GAAGATCTGGCCAAGTTCCGCCAGGGATCGTCGATTAGGATTAAGGAGAA
TGTGCATAAGTTCCTGATGTTCTATCTAAAAGTTCTGAGATGGTCGTACA
AGAATCAGCCAACGGATCTATATCGCAAATGGTATGGACAAAACTTTGGC
AAGGACCCAAAGTCTGCCCCATCGGCCGGCAATTCCGAGGATGAACAGCG
TGTTTGGTTGGAGGAGGGCAAGTCCTTTTACGCCATGAAAACATTTGAAG
ATGGCTCCACAGTTGTTTACTCAGCGGTGGTTAAGGATGCGAGAGCTGGT
TGGTCGGAAAATGGTCTGAAAACTCTGATGGAAACGCAAGTGGGCTGCGC
TTTGAATCGAAATGAAAATGCAAGCTTTCTAGACCAT
FMO04990.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17217-RA | 626 | CG17217-RA | 108..587 | 40..519 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12170657..12170899 | 40..282 | 1215 | 100 | Plus |
| 2L | 23513712 | 2L | 12170956..12171193 | 282..519 | 1190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:48 has no hits.
FMO04990.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:39 Download gff for
FMO04990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 108..593 | 40..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:59 Download gff for
FMO04990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 1..483 | 40..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:18 Download gff for
FMO04990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 108..593 | 40..527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:18 Download gff for
FMO04990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12170659..12170899 | 42..282 | 100 | -> | Plus |
| 2L | 12170957..12171199 | 283..527 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:39 Download gff for
FMO04990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12170659..12170899 | 42..282 | 100 | -> | Plus |
| arm_2L | 12170957..12171199 | 283..527 | 98 | | Plus |
