FMO04993.5prime Sequence
503 bp (503 high quality bases) assembled on 2008-08-12
> FMO04993.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGATATTAT
CTGAAGCACGTGATGACTGGATATCGCGTTTACCTGAACACTGGTATTCA
TTTACTGGGAAAGAGCGGAGCTTGCAATGTGGTACTAACCTACGACAATA
TGTCCGATATCCATGCCGTCGTTGTTGTTCGAAATGGGAGGATTTTCATT
AAAGACCTGGAATCCATCCATGGCATATATCTTAACTTCAAGGAACACCG
CCTTGGCTCTGAGTTTTATGAAATTTTCGTGGGCGACGATGTGGCCTTTG
GGGTTGCAACATTCGGACAGGAACTGGGCACTCCGCTTACGTACGGATGC
TTTACCGTTAGGTCGGAGGATTCAGATTTTGATCTAGACTTCTCCGATTC
TGAGGACGGCTTCTTCGATTTCGATGACGACGACAGCGACCAGTTCTATG
GGATCAACGAGAACGAGGAGCCACCCAGTTCCACAGCAAGCTTTCTAGAC
CAT
FMO04993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hog-RA | 611 | CG32595-RA | 79..525 | 39..485 | 2220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14718359..14718635 | 485..209 | 1370 | 99.6 | Minus |
| X | 23542271 | X | 14718693..14718864 | 210..39 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:53:19 has no hits.
FMO04993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:02 Download gff for
FMO04993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32595-RA | 79..528 | 39..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:01 Download gff for
FMO04993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32595-RA | 1..450 | 39..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:16 Download gff for
FMO04993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hog-RA | 79..528 | 39..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:16 Download gff for
FMO04993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14718694..14718864 | 39..209 | 100 | | Minus |
| X | 14718355..14718634 | 210..489 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:02 Download gff for
FMO04993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14612727..14612897 | 39..209 | 100 | | Minus |
| arm_X | 14612388..14612667 | 210..489 | 98 | <- | Minus |
