Clone FMO04994 Report

Search the DGRC for FMO04994

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:94
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32639-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04994.5prime Sequence

481 bp (481 high quality bases) assembled on 2008-08-12

> FMO04994.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACTGAGTACA
GTTCTCAGAGCCAAACTGAAAGTGATAGCGATGAGGGACCGGAACCGGAT
GTGGAGCAGGCCAGAACCGGTGGTTCCTCGGATGATCTGACCAGCAACGA
GTGGCTGAGCTTGCACGGATTTCCATCCGGCACCGATGATGAATTGCTGG
CCATTTTCTCACGCTTCTGTTCGATGAACGCGCATCGCAAAAGGAAGAAT
GGTCTAGAGCTGAGATTCGCAACCGCGGAGCATCTGCAGCTGGGCGTTCT
AATGGCCAAGCGTCTGGTGGTGTGCAACGTGCAGATCCACTGGCATGTGG
GTCGTATGGAGGATGATCCATCCCTTAATCCCAAGCCATCAAGGGAGCGA
AGTACGGCCGGTGGACTTGGCGTTTTTGGCAAGTTGCGAAGGGCATTCGC
CAATTATTTTCACGCAAGCTTTCTAGACCAT

FMO04994.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32639-RA 642 CG32639-RA 43..469 37..463 2135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13236098..13236524 463..37 2135 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:41:50 has no hits.

FMO04994.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:05 Download gff for FMO04994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 34..476 30..472 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:54 Download gff for FMO04994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 38..464 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:40 Download gff for FMO04994.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 34..476 30..472 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:40 Download gff for FMO04994.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13236091..13236534 30..472 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:05 Download gff for FMO04994.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13130124..13130567 30..472 98 -> Minus