Clone FMO04995 Report

Search the DGRC for FMO04995

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:95
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7211-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04995.5prime Sequence

377 bp (377 high quality bases) assembled on 2008-08-12

> FMO04995.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTCAATTG
ATTGCCAAGGCAAAGACCCTAGTAAACAAAATGATTGTGGCAGCACGTCC
GCAGCTCGATGAATTCTGGAAGTATGCCAAGGTGGAGCTATCACCGCCGC
TGCCCGCTGATTTCCAAAAGCTGAAGCAGACCGCTGAGTCCGCCAAGTTG
GCCTCCAAAAAGGATATGAAGGGGCAGCTAAAGAAGTCCGGACTTTCCCA
AGTGACAGTCGCTGAGGCCTGGCTAAATGTTCTGGTCACCGTGGAGGTGA
TTACCTGGTTCTACATGGGCGAGGTTATCGGTCGTCGTCACCTGGTCGGC
TACAAGGTTGCAAGCTTTCTAGACCAT

FMO04995.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7211-RA 547 CG7211-RA 107..427 39..359 1605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7747474..7747754 79..359 1405 100 Plus
2L 23513712 2L 7747381..7747420 39..78 200 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:46:11 has no hits.

FMO04995.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:48 Download gff for FMO04995.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7211-RA 100..427 31..359 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:30 Download gff for FMO04995.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7211-RA 32..359 31..359 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:45 Download gff for FMO04995.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7211-RA 100..427 31..359 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:45 Download gff for FMO04995.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7747374..7747420 31..78 91 -> Plus
2L 7747474..7747754 79..359 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:48 Download gff for FMO04995.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7747374..7747420 31..78 91 -> Plus
arm_2L 7747474..7747754 79..359 100   Plus