Clone FMO04996 Report

Search the DGRC for FMO04996

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:49
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10822-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04996.5prime Sequence

397 bp (397 high quality bases) assembled on 2008-08-12

> FMO04996.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGGAAGCAG
AGACAGATCCAAAGCGAACTAAAAGTTACGTGGAAGAAGTATTTCGCAAA
GTGCAGGAGAAACCCGGCGTGGAGGACATATTGATCATGAATCACTCGGG
TGTGCCGGTGAAAACCTCGATGGATCGTCAGGAGGGCTTGCAGTACGCCT
GTCTATATGACAATTTGCGGGAGAAGTGCCAGGCGTTCCTCTCCAAAATG
GAGCCAGCCCAAAATTTGACTCTACTGAGAGTTCGTACCAAGTATCACGA
GGTGCTCATTACACCAGATGCCAAGATCACCGTTTTGGTGGTTCAGAATG
CCAAAGATACTTTTCTTAACATAAAGGGTGCAAGCTTTCTAGACCAT

FMO04996.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10822-RA 554 CG10822-RA 111..452 38..379 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19951528..19951848 59..379 1605 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:53 has no hits.

FMO04996.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:38 Download gff for FMO04996.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 104..459 31..388 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:58 Download gff for FMO04996.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 1..345 38..380 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:05 Download gff for FMO04996.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10822-RA 104..459 31..388 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:05 Download gff for FMO04996.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19951528..19951855 59..388 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:38 Download gff for FMO04996.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15839033..15839360 59..388 98   Plus