FMO05009.5prime Sequence
375 bp (375 high quality bases) assembled on 2008-08-11
> FMO05009.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCTACCTATCCCAG
TGCTTCCGCATCCCAGTCGACAGGAACCTCTGACCTGGACACCGAGTCCG
TGGAAGTTCTGCGGGAGCGGCTGAGCACCATGAAGCGGCTGATGGCCGAG
CGGACGTCCCAGCAGCAAAACAACCCGGCGACCACGGAGGAGATATTCTC
CACCAAGCGCCACCGCTCGGCGGGCATCATCGATGGAAACTTCCTGAGCA
TCGCGTTCGGCGGAGCTCTGCTGGTGATCATCACGGTTTCGGTGTACGCC
TTCTACAGTCTCTACCATGCCATACTCAAGAAGTTCCCTTCGCGCCACGA
GGAGCTGGCAAGCTTTCTAGACCAT
FMO05009.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14312-RA | 494 | CG14312-RA | 75..398 | 34..357 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18283074..18283359 | 357..72 | 1430 | 100 | Minus |
| 3R | 32079331 | 3R | 18283414..18283454 | 74..34 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:00 has no hits.
FMO05009.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:56 Download gff for
FMO05009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14312-RA | 80..406 | 34..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:22 Download gff for
FMO05009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14312-RA | 1..327 | 34..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:59 Download gff for
FMO05009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14312-RA | 75..401 | 34..361 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:59 Download gff for
FMO05009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18283070..18283357 | 74..361 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:56 Download gff for
FMO05009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14108792..14109079 | 74..361 | 99 | <- | Minus |
