Clone FMO05010 Report

Search the DGRC for FMO05010

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:10
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14370-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05010.5prime Sequence

439 bp (439 high quality bases) assembled on 2008-08-11

> FMO05010.5prime
ACATTATACGAAGTTATCAGTCGACATGGTCAAGCATCTGGACAATGGAC
TTGTGTTCTACCGACTGATGCTGAGCTTTCCGCTAAGAATTGCACTGTAT
GCGGTGTACGTTTACCTGGAGAATTTGCTGGGGCTGATGCTTTTGATCCA
GGAAGTTCTGGTCCTTCAATTTCTATTCCTCTGCATGGTCATCCGGTGGG
TATACCCACCGTGGCCAGCAAATGGTATCGCTTCATCGCTGAGGTTTCGC
ACACGGAAAGCCCTCCAGATCTTCCTGACCATCTGGATCGTATTGCTCAA
CACGACCACCTATACGTGGAGCATCCCATGCCAGGGCATCATGCAACTCA
GCCGACTATTCCGGATATGCGCCTATAGTCGCACCTGGATCATGATACAG
CGCCACAATGGCGCCCGACGCGCAAGCTTTCTAGACCAT

FMO05010.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14370-RA 729 CG14370-RA 191..586 26..421 1980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13588187..13588582 26..421 1980 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:52 has no hits.

FMO05010.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:38 Download gff for FMO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14370-RA 185..595 20..429 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:47 Download gff for FMO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14370-RA 1..399 26..424 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:51 Download gff for FMO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14370-RA 185..595 20..429 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:51 Download gff for FMO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13588181..13588591 20..429 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:38 Download gff for FMO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9413903..9414313 20..429 98   Plus