FMO05011.5prime Sequence
345 bp (345 high quality bases) assembled on 2008-08-11
> FMO05011.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGAAAAGAA
ATATTGGGAGCCGGCAAAGGCTTTCCGCCCAAAAAACGAGAGGGCGAAAG
TAAGTATCTGGCACCAGTCATTCACACCGACGTACGAGCAGGAGGAGCCC
CAAATGGCACTGCTTCTATCCTGGCACTACGGTCGCCAGTGGATGGAGGA
GCGTGATATACACAGGATGGAGACCAAGTTGAAGATAAAGAAGGAGGCCA
ACTTCATTCCACCCAACTATACCAGTTGGCTTGAGAAGCGGAGGGCCATA
AAGACTAAGCAACAGCTGATCAGATCTGCAAGCTTTCTAGACCAT
FMO05011.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14659-RA | 449 | CG14659-RA | 35..325 | 37..327 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4830973..4831263 | 327..37 | 1455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:37:40 has no hits.
FMO05011.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:23 Download gff for
FMO05011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..333 | 30..336 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:21 Download gff for
FMO05011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 1..294 | 37..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:33 Download gff for
FMO05011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14659-RA | 30..333 | 30..336 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:33 Download gff for
FMO05011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4830964..4831268 | 30..336 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:23 Download gff for
FMO05011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 656686..656990 | 30..336 | 97 | | Minus |
