Clone FMO05012 Report

Search the DGRC for FMO05012

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:12
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14759-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05012.5prime Sequence

430 bp (430 high quality bases) assembled on 2008-08-11

> FMO05012.5prime
GTATAGCATACCTTATACGAAGTTATCAGTCGACATGTTCACCGGTCGGC
TTCTCATCGGGTCCCCGATATTCGAGGCTAAGATGCGGCTACAGCAGAGG
CGACGAATGTCAGAGCACAGGCTTCCGTACCATCGCAGACCTGCGCCCGT
AAAGCTCCAGGACCGTAAGAGTTCATGGACCGATCTAAAAAGGCCGCCCT
TCCTGCTGGTCAAGAGCTTCCTCAACTTGCGCCACATGGACGCCGACTAC
GGGAAGGACATGACACGAGTTACGGACGAGCTAAGTTTCCAGCCCCACCG
CACCCTCTTAATCAATACCGTGCGAGGGCCGCATCGTCAGTTTTCGGACA
CGGAACCAATTGCGGACATGATGGATAAAAGTCCGGTAGCTTTGGACTCG
GATTCGAAGCCGGCAAGCTTTCTAGACCAT

FMO05012.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14759-RB 557 CG14759-RB 110..487 35..412 1890 100 Plus
CG14759-RA 643 CG14759-RA 196..573 35..412 1890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260036..8260413 35..412 1890 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:34:23 has no hits.

FMO05012.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:46 Download gff for FMO05012.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..573 27..412 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:13 Download gff for FMO05012.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 1..381 35..415 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:03 Download gff for FMO05012.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14759-RA 192..573 27..412 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:03 Download gff for FMO05012.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8260032..8260413 27..412 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:46 Download gff for FMO05012.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4147537..4147918 27..412 98   Plus