FMO05014.5prime Sequence
442 bp (442 high quality bases) assembled on 2008-08-11
> FMO05014.5prime
CATACATTATACGAAGTTATCAGTCGACATGAGCGTGATCAAGTCCATAT
TTCTGCTCAGTATTTTGGCTGTCTGCCTCATTCCCCGGGAGACGGAGGCC
CAGGCCACTATAAGTGAAAGCTGGGGAAGGCTGGGCAAGTGTACTCAGGT
GGCCATCGAAACACTGACCAGCCTGGCCGATAAAATCGTCCCGACCGTAT
ATGAGTTGAAACAATGCTCCGGATACGTAACTTTGGAACCGGCAAACGGC
AAAGACAGAAAGATTACCTGGTACCTAAAGGTATCCTATGAATTCTTCAA
GAAACTTGTCTTTGACGAACCCAAATGTCTGCACGGTCTACTGAACAAGT
TGGCTGCCACAATCAAACCATTTGCCGAGCAGATATCGGGATTAGGTTGC
TTGGACGAAGAAGATTATATCATTGCAAGCTTTCTAGACCAT
FMO05014.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 590 | CG15616-RB | 40..435 | 29..424 | 1980 | 100 | Plus |
| Acp53C14b-RA | 499 | CG15616-RA | 40..435 | 29..424 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748970..16749323 | 424..71 | 1770 | 100 | Minus |
| 2R | 25286936 | 2R | 16749378..16749421 | 72..29 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:36:10 has no hits.
FMO05014.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:35 Download gff for
FMO05014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..425 | 21..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:07 Download gff for
FMO05014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..425 | 21..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:34 Download gff for
FMO05014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 33..438 | 21..428 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:34 Download gff for
FMO05014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748966..16749323 | 71..428 | 99 | <- | Minus |
| 2R | 16749380..16749428 | 21..70 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:35 Download gff for
FMO05014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12636471..12636828 | 71..428 | 99 | <- | Minus |
| arm_2R | 12636885..12636933 | 21..70 | 94 | | Minus |
