Clone FMO05019 Report

Search the DGRC for FMO05019

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:19
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18666-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05019.5prime Sequence

435 bp (435 high quality bases) assembled on 2008-08-11

> FMO05019.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTGACAAGGA
TAAGAAAGATAAACCGGAACAGTTGGATGATGATTCCAGTGACGACGATG
CCAACCAGAGAGCAGTTCGAGATCAGTATTCCGATCCTACCATCAGTGCA
TCCCCCTCGATTCTGCGACACCCCAACGCTCCCCGTCCTGATATTTCAAG
TGCCCCCTCGGTTGTCATTGCGTTGCCAAGTAGCGAGACCCTCGTCGTGA
CCGAGGAAACTCCGGAGGAGCGACTCCGGCGAAGAATGAGGTTTCTCGAG
TTGCGGCGTGAGCACTACAACTACGTCAGCCATAGCGAGCAATGCAACAT
GGCGGATACGGAGGATGAAGATCACACGGAGAATCACCCAAAGTGTGAAG
CCAATTGCAAGCCGGAAGCAAGCTTTCTAGACCAT

FMO05019.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG18666-RA 514 CG18666-RA 58..438 37..417 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11034852..11035232 37..417 1905 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:32:54 has no hits.

FMO05019.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:33 Download gff for FMO05019.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18666-RA 58..446 37..425 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:09 Download gff for FMO05019.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18666-RA 1..384 37..418 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:10 Download gff for FMO05019.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18666-RA 58..446 37..425 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:10 Download gff for FMO05019.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11034852..11035237 37..422 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:33 Download gff for FMO05019.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11034852..11035237 37..422 99 -> Plus