FMO05020.5prime Sequence
337 bp (337 high quality bases) assembled on 2008-08-11
> FMO05020.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGGTCTGGAGT
CGTATATCAATCACACAGTCTCCATCATTACGGCAGACGGACGGAACTTC
ATCGGGACACTCAAGGGATTCGACCAGACCATCAATATCATCATAGACGA
GTGCCATGAGCGCGTCTTCTCTACCACCTCCGGCATCGAGCAAATCGTGC
TGGGACTGCACATCATCCGGGGGGACAACATCGCGGTGATCGGACTGATA
GACGAGACCATCGACTCCCGCCTGGATTTGGCCAACATTAGGGGCGAGCC
GCTGGGTCCCGTGGTGCACGCAAGCTTTCTAGACCAT
FMO05020.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2021-RA | 402 | CG2021-RA | 82..366 | 35..319 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1777046..1777330 | 319..35 | 1425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:58:23 has no hits.
FMO05020.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:10 Download gff for
FMO05020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2021-RA | 82..366 | 35..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:09 Download gff for
FMO05020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2021-RA | 34..318 | 35..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:56 Download gff for
FMO05020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2021-RA | 82..366 | 35..319 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:56 Download gff for
FMO05020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1777046..1777330 | 35..319 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:10 Download gff for
FMO05020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1777046..1777330 | 35..319 | 100 | | Minus |
